Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844592.1_cds_XP_016509058.1_22019
CDS Infomation

[gene=LOC107826584] [db_xref=GeneID:107826584] [protein=chaperone protein ClpB1-like] [protein_id=XP_016509058.1] [location=join(10807..11959,12480..12661,12748..13370,13554..13833,13936..14133,14409..14690)] [gbkey=CDS]
Sequence

ATGAATCCTGAAAAGTTTACTCACAAGACCAATGAGGCACTTGCTGAGGCACATGAACTA
GCTATATCAGCAGGGCATGCTCAATTTACCCCCTTACATATGGCACTGGCCTTAATATCC
GATCACAACGGTATTTTCCGGCAAGCTATTGTGAATGCTGCTGGTAGTGAAGAAACAGCT
AATTCAGTTGAAAGGGTATTCAAACAAGCCATGAAGAAAATCCCTTCTCAAACACCAGCA
CCTGATCAAATCCCACCTAGCACATCACTGATTAAGGTGCTCCGACGAGCTCAGTCGTTG
CAAAAGTCTCGCAGAGACACCCATTTGGCAGTTGATCAGTTGATTTTAGGCCTTCTAGAA
GATTCCCAAATTGGTGATCTTTTAAAAGAAGCTGGGATTGGTGCAGCAAGAGTGAAATCA
GAAGTAGAGAAACTTAGGGGAAAAGATGGCAAAAAGGTTGAAAGTGCTTCAGGGGACACT
AATTTCCAAGCACTTAAGACTTATGGTCGTGATCTTGTTGAACAAGCAGGAAAACTTGAT
CCTGTGATCGGTAGGGATGAAGAAATTCGAAGAGTAATTCGGATTTTGTCGAGGAGGACG
AAGAATAATCCGGTGCTTATTGGTGAGCCTGGTGTTGGTAAAACAGCAGTAGTTGAAGGG
CTAGCACAAAGGATTGTTCGAGGCGATGTCCCGAGTAATTTGTCTGATGTTAGACTTATA
GCATTGGATATGGGGGCATTAATTGCTGGAGCAAAATATAGAGGTGAATTTGAAGAGAGG
TTGAAGGCAGTGTTAAAGGAAGTGGAAGAAGCAGAAGGGAAAGTGATCCTTTTTATTGAT
GAGATTCACTTGGTTTTAGGTGCTGGTAGGACTGAAGGGTCTATGGATGCTGCCAATTTG
TTTAAGCCAATGCTTGCTAGGGGCCAATTAAGGTGCATTGGTGCAACAACTCTCGAGGAG
TATAGGAAGTATGTCGAAAAGGATGCTGCGTTCGAAAGGCGTTTCCAGCAGGTATACGTG
GCTGAGCCTAGTGTTCCTGACACTATTAGTATCCTTCGTGGGTTGAAGGAGAAGTATGAA
GGGCATCATGGTGTCAAAATTCAAGATAGAGCTCTTGTGGTGGCAGCCCAGCTTTCGGCT
CGATACATTACAGGTCGTCATTTGCCAGATAAGGCTATTGACCTAGTTGATGAGGCTTGT
GCAAATGTAAGAGTTCAACTTGATAGTCAACCTGAAGAAATTGATAATCTTGAAAGAAAG
AGGATTCAGCTAGAAGTTGAACTTCATGCACTTGAGAAGGAAAAGGACAAGGCTAGCAAA
GCTCGACTCGTTGAAGTGAGAAAAGAACTTGATGATTTGAGGGACAAACTCCAGCCTTTG
ACGATGAGGTATAAGAAAGAGAAGGAAAGAATTGACGAGCTTCGCAGGCTCAAACAAAAG
CGTGATGAACTCACGTATGCTTTACAAGAAGCTGAAAGGAGATATGATCTTGCTAGAGCA
GCAGATCTTAGGTATGGGGCTATCCAAGAAGTGGAAGCTGCTATAGCAAATCTCGAGAGT
AGCACAGATGAGAGTACAATGTTAACTGAGACTGTTGGACCTGATCAAATCGCGGAAGTA
GTCAGTCGGTGGACTGGTATTCCTGTGTCAAGGCTTGGTCAGAATGAGAAAGACAAATTG
ATTGGTCTTGCTAATAGATTGCACCAAAGAGTGGTTGGGCAGGATGATGCAGTTAGAGCT
GTTGCTGAGGCTGTATTAAGGTCTAGAGCTGGGTTGGGAAGGCCACAACAACCAACTGGT
TCATTCCTTTTCTTGGGACCAACTGGTGTTGGAAAAACTGAACTTGCTAAGGCTCTCGCT
GAGCAGCTCTTTGATGACGACAAGTTGATGGTCAGAATTGACATGTCCGAATACATGGAA
CAGCATTCTGTTGCCAGGTTGATTGGTGCTCCACCAGGTTATGTTGGACATGAGGAAGGA
GGACAACTCACTGAAGCTGTGAGGAGGCGCCCTTACAGTGTAGTGCTTTTTGACGAAGTG
GAAAAAGCTCATCCCACTGTATTCAATACCTTGCTCCAAGTGCTGGACGATGGACGATTA
ACAGATGGCCAGGGTCGTACCGTTGATTTTACTAATACAGTCATCATTATGACCTCAAAT
CTAGGAGCAGAGTATCTCTTGTCAGGATTAATGGGCAAGTGCACCATGGAGAAGGCCCGC
GATATGGTCATGCAGGAGGTGAGGAAGCAGTTTAAGCCTGAGTTATTGAACCGGCTAGAT
GAGATTGTAGTGTTTGATCCTTTATCACACGAGCAGTTGAGGCAAGTATGCCGTCACCAA
CTGAAAGATGTAGCAAGCCGTTTAGCTGAGAGGGGTATCGCCTTGGGCGTTACCGAGGCC
GCGTTAGATGTCATACTTGCTCAGAGTTATGACCCTGTTTATGGTGCAAGACCTATTAGA
AGGTGGTTGGAGAAAAAAGTGGTAACTGAGTTATCCAAGATGCTCGTGAAAGAGGAGATT
GATGAGAATTCTACCGTCTACGTCGATGCTGCATCCAGTGGGAAAGATCTAAGCTACCGA
GTGGAGAAAAATGGAGGGCTTGTCAATGCTGCCACTGGGAAAAAATCTGATATATTGATT
CAGCTCCCTAATGGAGTGAGGAGTGATGCTGCTCAAGCAGTGAAAAAGATGAAGATTGAA
GAAATAGTAGACGAATGA

Peptide Sequence

PEP ID

XP_016509058.1
PEP Infomation

PREDICTED: chaperone protein ClpB1-like [Nicotiana tabacum]
Sequence

MNPEKFTHKTNEALAEAHELAISAGHAQFTPLHMALALISDHNGIFRQAIVNAAGSEETA
NSVERVFKQAMKKIPSQTPAPDQIPPSTSLIKVLRRAQSLQKSRRDTHLAVDQLILGLLE
DSQIGDLLKEAGIGAARVKSEVEKLRGKDGKKVESASGDTNFQALKTYGRDLVEQAGKLD
PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLSDVRLI
ALDMGALIAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYE
GHHGVKIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
RIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMRYKKEKERIDELRRLKQK
RDELTYALQEAERRYDLARAADLRYGAIQEVEAAIANLESSTDESTMLTETVGPDQIAEV
VSRWTGIPVSRLGQNEKDKLIGLANRLHQRVVGQDDAVRAVAEAVLRSRAGLGRPQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDDKLMVRIDMSEYMEQHSVARLIGAPPGYVGHEEG
GQLTEAVRRRPYSVVLFDEVEKAHPTVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSN
LGAEYLLSGLMGKCTMEKARDMVMQEVRKQFKPELLNRLDEIVVFDPLSHEQLRQVCRHQ
LKDVASRLAERGIALGVTEAALDVILAQSYDPVYGARPIRRWLEKKVVTELSKMLVKEEI
DENSTVYVDAASSGKDLSYRVEKNGGLVNAATGKKSDILIQLPNGVRSDAAQAVKKMKIE
EIVDE

Transcript Sequence

Gene sequence data has not been registered.